Index

_

__author__ (in module toolbox)

__credits__ (in module toolbox)

A

add_datetime_secondary_xaxis() (in module toolbox.utils.time) add_missing_columns_dev() (toolbox.steps.custom.load_data.LoadOG1 method) add_pipeline() (toolbox.pipeline.PipelineManager method)

add_step() (toolbox.pipeline.Pipeline method) AdjustSalinity (class in toolbox.steps.custom.variables.salinity) alignment_map (toolbox.pipeline.PipelineManager attribute) ArgoQCStep (class in toolbox.steps.custom.argo_qc)

B

BaseStep (class in toolbox.steps) (class in toolbox.steps.base_step)

build_steps() (toolbox.pipeline.Pipeline method)

C

call_CTlag() (toolbox.steps.custom.variables.salinity.AdjustSalinity method) check_missing_values() (in module toolbox.utils.diagnostics) compute_optimal_lag() (toolbox.steps.custom.variables.salinity.AdjustSalinity method)

context (toolbox.steps.base_step.BaseStep attribute) (toolbox.steps.BaseStep attribute) create_step() (in module toolbox.steps)

D

DeriveCTDVariables (class in toolbox.steps.custom.derive_ctd) df (toolbox.steps.custom.argo_qc.impossible_date_test attribute) (toolbox.steps.custom.argo_qc.impossible_location_test attribute) diagnostics (toolbox.steps.base_step.BaseStep attribute) (toolbox.steps.BaseStep attribute)

discover_steps() (in module toolbox.steps) display_adj_profiles() (toolbox.steps.custom.variables.salinity.AdjustSalinity method) display_CTLag() (toolbox.steps.custom.variables.salinity.AdjustSalinity method) display_tsr_adj() (toolbox.steps.custom.variables.salinity.AdjustSalinity method) display_tsr_raw() (toolbox.steps.custom.variables.salinity.AdjustSalinity method)

E

execute_step() (toolbox.pipeline.Pipeline method)

export_config() (toolbox.pipeline.Pipeline method) ExportStep (class in toolbox.steps.custom.export)

F

f_addElapsedTime() (toolbox.steps.custom.load_data.LoadOG1 method) f_addMeta() (toolbox.steps.custom.load_data.LoadOG1 method) FactoryCalibrationStep (class in toolbox.steps.custom.calibration) find_candidate_glider_pairs() (in module toolbox.utils.diagnostics)

find_closest_prof() (in module toolbox.utils.diagnostics) find_profiles() (in module toolbox.steps.custom.find_profiles) FindProfilesStep (class in toolbox.steps.custom.find_profiles) flags (toolbox.steps.custom.argo_qc.impossible_date_test attribute) (toolbox.steps.custom.argo_qc.impossible_location_test attribute)

G

generate_config() (toolbox.pipeline.Pipeline method) generate_diagnostics() (toolbox.steps.base_step.BaseStep method) (toolbox.steps.BaseStep method) (toolbox.steps.custom.export.ExportStep method) (toolbox.steps.custom.find_profiles.FindProfilesStep method) (toolbox.steps.custom.load_data.LoadOG1 method) (toolbox.steps.custom.variables.salinity.AdjustSalinity method)

generate_info() (in module toolbox.utils.diagnostics) GenerateData (class in toolbox.steps.custom.gen_data) get_cached_contexts() (toolbox.pipeline.PipelineManager method) get_contexts() (toolbox.pipeline.PipelineManager method) global_range_test() (in module toolbox.steps.custom.argo_qc) graph (toolbox.pipeline.Pipeline attribute)

I

impossible_date_test (class in toolbox.steps.custom.argo_qc)

impossible_location_test (class in toolbox.steps.custom.argo_qc) impossible_speed_test() (in module toolbox.steps.custom.argo_qc)

L

load_mission_control() (toolbox.pipeline.PipelineManager method) LoadOG1 (class in toolbox.steps.custom.load_data)

log() (toolbox.steps.base_step.BaseStep method) (toolbox.steps.BaseStep method)

M

module toolbox toolbox.pipeline toolbox.steps toolbox.steps.base_step toolbox.steps.custom toolbox.steps.custom.argo_qc toolbox.steps.custom.calibration toolbox.steps.custom.derive_ctd toolbox.steps.custom.export toolbox.steps.custom.find_profiles toolbox.steps.custom.gen_data toolbox.steps.custom.load_data toolbox.steps.custom.variables toolbox.steps.custom.variables.salinity toolbox.utils toolbox.utils.alignment toolbox.utils.calibration toolbox.utils.diagnostics toolbox.utils.time

N

name (toolbox.steps.base_step.BaseStep attribute) (toolbox.steps.BaseStep attribute)

O

organise_flags() (toolbox.steps.custom.argo_qc.ArgoQCStep method)

P

parameters (toolbox.steps.base_step.BaseStep attribute) (toolbox.steps.BaseStep attribute) Pipeline (class in toolbox.pipeline) PipelineManager (class in toolbox.pipeline) pipelines (toolbox.pipeline.PipelineManager attribute) plot_boxplot() (in module toolbox.utils.diagnostics) plot_correlation_matrix() (in module toolbox.utils.diagnostics) plot_diagnostics() (toolbox.steps.custom.argo_qc.impossible_date_test method) (toolbox.steps.custom.argo_qc.impossible_location_test method) (toolbox.steps.custom.argo_qc.QC_Test method)

plot_distance_time_grid() (in module toolbox.utils.diagnostics) plot_glider_pair_heatmap_grid() (in module toolbox.utils.diagnostics) plot_heatmap_glider_df() (in module toolbox.utils.diagnostics) plot_histogram() (in module toolbox.utils.diagnostics) plot_time_series() (in module toolbox.utils.diagnostics) position_on_land_test() (in module toolbox.steps.custom.argo_qc) pressure_increasing_test() (in module toolbox.steps.custom.argo_qc)

Q

QC_Test (class in toolbox.steps.custom.argo_qc)

QCSalinity (class in toolbox.steps.custom.variables.salinity)

R

regional_range_test() (in module toolbox.steps.custom.argo_qc) register_step() (in module toolbox.steps.base_step) REGISTERED_STEPS (in module toolbox.steps) (in module toolbox.steps.base_step) return_qc() (toolbox.steps.custom.argo_qc.impossible_date_test method) (toolbox.steps.custom.argo_qc.impossible_location_test method) (toolbox.steps.custom.argo_qc.QC_Test method) run() (toolbox.pipeline.Pipeline method) (toolbox.steps.base_step.BaseStep method) (toolbox.steps.BaseStep method) (toolbox.steps.custom.argo_qc.ArgoQCStep method) (toolbox.steps.custom.calibration.FactoryCalibrationStep method) (toolbox.steps.custom.calibration.SensorCalibrationStep method) (toolbox.steps.custom.derive_ctd.DeriveCTDVariables method) (toolbox.steps.custom.export.ExportStep method) (toolbox.steps.custom.find_profiles.FindProfilesStep method) (toolbox.steps.custom.gen_data.GenerateData method) (toolbox.steps.custom.load_data.LoadOG1 method) (toolbox.steps.custom.variables.salinity.AdjustSalinity method)

run_all() (toolbox.pipeline.PipelineManager method) run_last_step() (toolbox.pipeline.Pipeline method) running_average_nan() (in module toolbox.steps.custom.variables.salinity)

S

safe_median_datetime() (in module toolbox.utils.time) SensorCalibrationStep (class in toolbox.steps.custom.calibration) settings (toolbox.pipeline.PipelineManager attribute) spike_test() (in module toolbox.steps.custom.argo_qc) STEP_CLASSES (in module toolbox.steps) STEP_DEPENDENCIES (in module toolbox.steps) step_name (toolbox.steps.custom.argo_qc.ArgoQCStep attribute) (toolbox.steps.custom.calibration.FactoryCalibrationStep attribute) (toolbox.steps.custom.calibration.SensorCalibrationStep attribute) (toolbox.steps.custom.derive_ctd.DeriveCTDVariables attribute), [1] (toolbox.steps.custom.export.ExportStep attribute) (toolbox.steps.custom.find_profiles.FindProfilesStep attribute) (toolbox.steps.custom.gen_data.GenerateData attribute) (toolbox.steps.custom.load_data.LoadOG1 attribute) (toolbox.steps.custom.variables.salinity.AdjustSalinity attribute) (toolbox.steps.custom.variables.salinity.QCSalinity attribute)

steps (toolbox.pipeline.Pipeline attribute) summarise_all_profiles() (toolbox.pipeline.PipelineManager method) summarising_profiles() (in module toolbox.utils.diagnostics)

T

test_number (toolbox.steps.custom.argo_qc.impossible_date_test attribute) (toolbox.steps.custom.argo_qc.impossible_location_test attribute) thermal_lag_correction() (toolbox.steps.custom.variables.salinity.AdjustSalinity method) toolbox module toolbox.pipeline module toolbox.steps module toolbox.steps.base_step module toolbox.steps.custom module toolbox.steps.custom.argo_qc module toolbox.steps.custom.calibration module toolbox.steps.custom.derive_ctd module toolbox.steps.custom.export module

toolbox.steps.custom.find_profiles module toolbox.steps.custom.gen_data module toolbox.steps.custom.load_data module toolbox.steps.custom.variables module toolbox.steps.custom.variables.salinity module toolbox.utils module toolbox.utils.alignment module toolbox.utils.calibration module toolbox.utils.diagnostics module toolbox.utils.time module

V

visualise_pipeline() (toolbox.pipeline.Pipeline method)