Index _ | A | B | C | D | E | F | G | I | L | M | N | O | P | Q | R | S | T | U | V | W _ __author__ (in module src.toolbox) __credits__ (in module src.toolbox) __setattr__() (src.toolbox.utils.config_mirror.ConfigMirrorMixin method) A add_datetime_secondary_xaxis() (in module src.toolbox.utils.time) add_pipeline() (src.toolbox.pipeline_manager.PipelineManager method) add_step() (src.toolbox.pipeline.Pipeline method) AdjustSalinity (class in src.toolbox.steps.custom.variables.salinity) aggregate_vars() (in module src.toolbox.utils.alignment) alignment_map (src.toolbox.pipeline_manager.PipelineManager attribute) apply_adjustment() (src.toolbox.pipeline_manager.PipelineManager method) apply_dark_correction() (src.toolbox.steps.custom.variables.chla.chla_deep_correction method) apply_linear_map_to_da() (in module src.toolbox.utils.alignment) apply_xing2012_quenching_correction() (src.toolbox.steps.custom.variables.chla.chla_quenching_correction method) ApplyQC (class in src.toolbox.steps.custom.apply_qc) B BaseStep (class in src.toolbox.steps.base_step) BaseTest (class in src.toolbox.steps.base_test) BBPFromBeta (class in src.toolbox.steps.custom.variables.bbp) behaviour (src.toolbox.utils.qc_handling.QCHandlingMixin attribute) BlankStep (class in src.toolbox.steps.custom.blank_step) build_steps() (src.toolbox.pipeline.Pipeline method) C calculate_mld() (src.toolbox.steps.custom.variables.chla.chla_quenching_correction method) calculate_solar_elevation() (in module src.toolbox.steps.custom.qc.par_irregularity_test) check_chl_variables() (in module src.toolbox.steps.custom.variables.chla) check_config() (in module src.toolbox.steps.custom.variables.oxygen) check_missing_values() (in module src.toolbox.utils.diagnostics) chla_deep_correction (class in src.toolbox.steps.custom.variables.chla) chla_quenching_correction (class in src.toolbox.steps.custom.variables.chla) collect_xy_from_r2_ds() (in module src.toolbox.utils.alignment) compute_dark_value() (src.toolbox.steps.custom.variables.chla.chla_deep_correction method) compute_optimal_lag() (in module src.toolbox.steps.custom.variables.salinity) compute_r2_for_merged_profiles_xr() (in module src.toolbox.utils.alignment) ConfigMirrorMixin (class in src.toolbox.utils.config_mirror) context (src.toolbox.steps.base_step.BaseStep attribute) (src.toolbox.steps.custom.profile_direction.ProfileDirection attribute) correct_ct_lag() (src.toolbox.steps.custom.variables.salinity.AdjustSalinity method) correct_thermal_lag() (src.toolbox.steps.custom.variables.salinity.AdjustSalinity method) create_step() (in module src.toolbox.steps) D data (src.toolbox.steps.base_test.BaseTest attribute) (src.toolbox.steps.custom.profile_direction.ProfileDirection attribute) (src.toolbox.utils.qc_handling.QCHandlingMixin attribute) data_copy (src.toolbox.utils.qc_handling.QCHandlingMixin attribute) DeriveCalibratedPhase (class in src.toolbox.steps.custom.variables.oxygen) DeriveCTDVariables (class in src.toolbox.steps.custom.derive_ctd) DeriveOptodeTemperature (class in src.toolbox.steps.custom.variables.oxygen) DeriveOxygenConcentration (class in src.toolbox.steps.custom.variables.oxygen) DeriveUncalibratedPhase (class in src.toolbox.steps.custom.variables.oxygen) diagnostics (src.toolbox.steps.base_step.BaseStep attribute) discover_steps() (in module src.toolbox.steps) display_adj_profiles() (src.toolbox.steps.custom.variables.salinity.AdjustSalinity method) display_CTLag() (src.toolbox.steps.custom.variables.salinity.AdjustSalinity method) dump_config_json() (src.toolbox.utils.config_mirror.ConfigMirrorMixin method) dynamic (src.toolbox.steps.custom.qc.flag_full_profile.flag_full_profile attribute) (src.toolbox.steps.custom.qc.range_test.range_test attribute) (src.toolbox.steps.custom.qc.spike_test.spike_test attribute) (src.toolbox.steps.custom.qc.stuck_value_test.stuck_value_test attribute) E execute_step() (src.toolbox.pipeline.Pipeline method) expected_parameters (src.toolbox.steps.base_test.BaseTest attribute) (src.toolbox.steps.custom.qc.blank_test.impossible_date_test attribute) (src.toolbox.steps.custom.qc.flag_full_profile.flag_full_profile attribute) (src.toolbox.steps.custom.qc.impossible_date_test.impossible_date_test attribute) (src.toolbox.steps.custom.qc.impossible_location_test.impossible_location_test attribute) (src.toolbox.steps.custom.qc.impossible_speed_test.impossible_speed_test attribute) (src.toolbox.steps.custom.qc.par_irregularity_test.par_irregularity_test attribute) (src.toolbox.steps.custom.qc.position_on_land_test.position_on_land_test attribute) (src.toolbox.steps.custom.qc.range_test.range_test attribute) (src.toolbox.steps.custom.qc.spike_test.spike_test attribute) (src.toolbox.steps.custom.qc.stuck_value_test.stuck_value_test attribute) (src.toolbox.steps.custom.qc.valid_profile_test.valid_profile_test attribute) export_config() (src.toolbox.pipeline.Pipeline method) ExportStep (class in src.toolbox.steps.custom.export) F filter_qc() (src.toolbox.utils.qc_handling.QCHandlingMixin method) filter_settings (src.toolbox.utils.qc_handling.QCHandlingMixin attribute) filter_xarray_by_profile_ids() (in module src.toolbox.utils.alignment) find_candidate_glider_pairs() (in module src.toolbox.utils.diagnostics) find_closest_prof() (in module src.toolbox.utils.diagnostics) find_nans() (in module src.toolbox.utils.processing_utils) find_profile_pair_metadata() (in module src.toolbox.utils.alignment) find_profiles() (in module src.toolbox.steps.custom.find_profiles) FindProfilesStep (class in src.toolbox.steps.custom.find_profiles) fit_and_save_to_target() (src.toolbox.pipeline_manager.PipelineManager method) fit_linear_map() (in module src.toolbox.utils.alignment) fit_to_device() (src.toolbox.pipeline_manager.PipelineManager method) flag_cols (in module src.toolbox.steps.base_test) flag_full_profile (class in src.toolbox.steps.custom.qc.flag_full_profile) flag_mapping (src.toolbox.utils.qc_handling.QCHandlingMixin attribute) flags (src.toolbox.steps.base_test.BaseTest attribute) (src.toolbox.steps.custom.qc.flag_full_profile.flag_full_profile attribute) (src.toolbox.steps.custom.qc.range_test.range_test attribute) (src.toolbox.steps.custom.qc.spike_test.spike_test attribute) (src.toolbox.steps.custom.qc.stuck_value_test.stuck_value_test attribute) func_poly() (src.toolbox.steps.custom.variables.oxygen.DeriveOxygenConcentration method) func_SVU() (src.toolbox.steps.custom.variables.oxygen.DeriveOxygenConcentration method) G generate_config() (src.toolbox.pipeline.Pipeline method) (src.toolbox.steps.base_step.BaseStep method) generate_diagnostics() (src.toolbox.steps.base_step.BaseStep method) (src.toolbox.steps.custom.blank_step.BlankStep method) (src.toolbox.steps.custom.export.ExportStep method) (src.toolbox.steps.custom.find_profiles.FindProfilesStep method) (src.toolbox.steps.custom.interpolate_data.InterpolateVariables method) (src.toolbox.steps.custom.load_data.LoadOG1 method) (src.toolbox.steps.custom.profile_direction.ProfileDirection method) (src.toolbox.steps.custom.variables.bbp.BBPFromBeta method) (src.toolbox.steps.custom.variables.bbp.IsolateBBPSpikes method) (src.toolbox.steps.custom.variables.chla.chla_deep_correction method) (src.toolbox.steps.custom.variables.chla.chla_quenching_correction method) (src.toolbox.steps.custom.variables.oxygen.DeriveCalibratedPhase method) (src.toolbox.steps.custom.variables.oxygen.DeriveOptodeTemperature method) (src.toolbox.steps.custom.variables.oxygen.DeriveOxygenConcentration method) (src.toolbox.steps.custom.variables.oxygen.DeriveUncalibratedPhase method) (src.toolbox.steps.custom.variables.oxygen.MolarDOXYPressureCorrection method) (src.toolbox.steps.custom.variables.oxygen.MolarDOXYSalinityCorrection method) (src.toolbox.steps.custom.variables.oxygen.PhasePressureCorrection method) (src.toolbox.steps.custom.variables.salinity.AdjustSalinity method) generate_info() (in module src.toolbox.utils.diagnostics) generate_qc() (src.toolbox.utils.qc_handling.QCHandlingMixin method) GenerateData (class in src.toolbox.steps.custom.gen_data) get_contexts() (src.toolbox.pipeline_manager.PipelineManager method) get_param() (src.toolbox.utils.config_mirror.ConfigMirrorMixin method) global_parameters (src.toolbox.pipeline.Pipeline attribute) graph (src.toolbox.pipeline.Pipeline attribute) I impossible_date_test (class in src.toolbox.steps.custom.qc.blank_test) (class in src.toolbox.steps.custom.qc.impossible_date_test) impossible_location_test (class in src.toolbox.steps.custom.qc.impossible_location_test) impossible_speed_test (class in src.toolbox.steps.custom.qc.impossible_speed_test) interpolate_DEPTH() (in module src.toolbox.utils.alignment) interpolate_nans() (in module src.toolbox.utils.processing_utils) InterpolateVariables (class in src.toolbox.steps.custom.interpolate_data) IsolateBBPSpikes (class in src.toolbox.steps.custom.variables.bbp) L load_config() (src.toolbox.utils.config_mirror.ConfigMirrorMixin method) load_config_from_file() (src.toolbox.utils.config_mirror.ConfigMirrorMixin method) load_data() (src.toolbox.pipeline_manager.PipelineManager method) load_device_folder_to_xarray() (in module src.toolbox.utils.validation) load_mission_control() (src.toolbox.pipeline_manager.PipelineManager method) LoadOG1 (class in src.toolbox.steps.custom.load_data) log() (src.toolbox.steps.base_step.BaseStep method) log_warn() (src.toolbox.steps.base_step.BaseStep method) M major_axis_r2_xr() (in module src.toolbox.utils.alignment) merge_pairs_from_filtered_aggregates() (in module src.toolbox.utils.alignment) module src.toolbox src.toolbox.pipeline src.toolbox.pipeline_manager src.toolbox.steps src.toolbox.steps.base_step src.toolbox.steps.base_test src.toolbox.steps.custom src.toolbox.steps.custom.apply_qc src.toolbox.steps.custom.blank_step src.toolbox.steps.custom.derive_ctd src.toolbox.steps.custom.export src.toolbox.steps.custom.find_profiles src.toolbox.steps.custom.gen_data src.toolbox.steps.custom.interpolate_data src.toolbox.steps.custom.load_data src.toolbox.steps.custom.profile_direction src.toolbox.steps.custom.qc src.toolbox.steps.custom.qc.archive src.toolbox.steps.custom.qc.blank_test src.toolbox.steps.custom.qc.flag_full_profile src.toolbox.steps.custom.qc.impossible_date_test src.toolbox.steps.custom.qc.impossible_location_test src.toolbox.steps.custom.qc.impossible_speed_test src.toolbox.steps.custom.qc.par_irregularity_test src.toolbox.steps.custom.qc.position_on_land_test src.toolbox.steps.custom.qc.range_test src.toolbox.steps.custom.qc.spike_test src.toolbox.steps.custom.qc.stuck_value_test src.toolbox.steps.custom.qc.valid_profile_test src.toolbox.steps.custom.variables src.toolbox.steps.custom.variables.bbp src.toolbox.steps.custom.variables.chla src.toolbox.steps.custom.variables.oxygen src.toolbox.steps.custom.variables.salinity src.toolbox.utils src.toolbox.utils.alignment src.toolbox.utils.config_mirror src.toolbox.utils.diagnostics src.toolbox.utils.processing_utils src.toolbox.utils.qc_handling src.toolbox.utils.time src.toolbox.utils.validation MolarDOXYPressureCorrection (class in src.toolbox.steps.custom.variables.oxygen) MolarDOXYSalinityCorrection (class in src.toolbox.steps.custom.variables.oxygen) N name (src.toolbox.steps.base_step.BaseStep attribute) O organise_flags() (src.toolbox.steps.custom.apply_qc.ApplyQC method) oxy_solubility_salinity_correction() (src.toolbox.steps.custom.variables.oxygen.MolarDOXYSalinityCorrection method) P par_irregularity_test (class in src.toolbox.steps.custom.qc.par_irregularity_test) parameters (src.toolbox.steps.base_step.BaseStep attribute) PhasePressureCorrection (class in src.toolbox.steps.custom.variables.oxygen) Pipeline (class in src.toolbox.pipeline) PipelineManager (class in src.toolbox.pipeline_manager) pipelines (src.toolbox.pipeline_manager.PipelineManager attribute) plot_boxplot() (in module src.toolbox.utils.diagnostics) plot_correlation_matrix() (in module src.toolbox.utils.diagnostics) plot_diagnostics() (src.toolbox.steps.base_test.BaseTest method) (src.toolbox.steps.custom.qc.blank_test.impossible_date_test method) (src.toolbox.steps.custom.qc.flag_full_profile.flag_full_profile method) (src.toolbox.steps.custom.qc.impossible_date_test.impossible_date_test method) (src.toolbox.steps.custom.qc.impossible_location_test.impossible_location_test method) (src.toolbox.steps.custom.qc.impossible_speed_test.impossible_speed_test method) (src.toolbox.steps.custom.qc.par_irregularity_test.par_irregularity_test method) (src.toolbox.steps.custom.qc.position_on_land_test.position_on_land_test method) (src.toolbox.steps.custom.qc.range_test.range_test method) (src.toolbox.steps.custom.qc.spike_test.spike_test method) (src.toolbox.steps.custom.qc.stuck_value_test.stuck_value_test method) (src.toolbox.steps.custom.qc.valid_profile_test.valid_profile_test method) plot_distance_time_grid() (in module src.toolbox.utils.diagnostics) plot_glider_pair_heatmap_grid() (in module src.toolbox.utils.diagnostics) plot_heatmap_glider_df() (in module src.toolbox.utils.diagnostics) plot_histogram() (in module src.toolbox.utils.diagnostics) plot_pair_scatter_grid() (in module src.toolbox.utils.alignment) plot_r2_heatmaps_per_pair() (in module src.toolbox.utils.alignment) plot_time_series() (in module src.toolbox.utils.diagnostics) position_on_land_test (class in src.toolbox.steps.custom.qc.position_on_land_test) preview_alignment() (src.toolbox.pipeline_manager.PipelineManager method) print_qc_settings() (src.toolbox.utils.qc_handling.QCHandlingMixin method) ProfileDirection (class in src.toolbox.steps.custom.profile_direction) Q QC_CLASSES (in module src.toolbox.steps) qc_outputs (src.toolbox.steps.base_test.BaseTest attribute) (src.toolbox.steps.custom.qc.blank_test.impossible_date_test attribute) (src.toolbox.steps.custom.qc.impossible_date_test.impossible_date_test attribute) (src.toolbox.steps.custom.qc.impossible_location_test.impossible_location_test attribute) (src.toolbox.steps.custom.qc.impossible_speed_test.impossible_speed_test attribute) (src.toolbox.steps.custom.qc.par_irregularity_test.par_irregularity_test attribute) (src.toolbox.steps.custom.qc.position_on_land_test.position_on_land_test attribute) (src.toolbox.steps.custom.qc.range_test.range_test attribute) (src.toolbox.steps.custom.qc.spike_test.spike_test attribute) (src.toolbox.steps.custom.qc.stuck_value_test.stuck_value_test attribute) (src.toolbox.steps.custom.qc.valid_profile_test.valid_profile_test attribute) qc_par_flagging() (in module src.toolbox.steps.custom.qc.par_irregularity_test) QCHandlingMixin (class in src.toolbox.utils.qc_handling) R range_test (class in src.toolbox.steps.custom.qc.range_test) reconstruct_data() (src.toolbox.utils.qc_handling.QCHandlingMixin method) register_qc() (in module src.toolbox.steps.base_test) register_step() (in module src.toolbox.steps.base_step) REGISTERED_QC (in module src.toolbox.steps) (in module src.toolbox.steps.base_test) REGISTERED_STEPS (in module src.toolbox.steps) (in module src.toolbox.steps.base_step) remove_outliers() (in module src.toolbox.utils.processing_utils) required_variables (src.toolbox.steps.base_test.BaseTest attribute) (src.toolbox.steps.custom.qc.blank_test.impossible_date_test attribute) (src.toolbox.steps.custom.qc.flag_full_profile.flag_full_profile attribute) (src.toolbox.steps.custom.qc.impossible_date_test.impossible_date_test attribute) (src.toolbox.steps.custom.qc.impossible_location_test.impossible_location_test attribute) (src.toolbox.steps.custom.qc.impossible_speed_test.impossible_speed_test attribute) (src.toolbox.steps.custom.qc.par_irregularity_test.par_irregularity_test attribute) (src.toolbox.steps.custom.qc.position_on_land_test.position_on_land_test attribute) (src.toolbox.steps.custom.qc.range_test.range_test attribute) (src.toolbox.steps.custom.qc.spike_test.spike_test attribute) (src.toolbox.steps.custom.qc.stuck_value_test.stuck_value_test attribute) (src.toolbox.steps.custom.qc.valid_profile_test.valid_profile_test attribute) return_qc() (src.toolbox.steps.base_test.BaseTest method) (src.toolbox.steps.custom.qc.blank_test.impossible_date_test method) (src.toolbox.steps.custom.qc.flag_full_profile.flag_full_profile method) (src.toolbox.steps.custom.qc.impossible_date_test.impossible_date_test method) (src.toolbox.steps.custom.qc.impossible_location_test.impossible_location_test method) (src.toolbox.steps.custom.qc.impossible_speed_test.impossible_speed_test method) (src.toolbox.steps.custom.qc.par_irregularity_test.par_irregularity_test method) (src.toolbox.steps.custom.qc.position_on_land_test.position_on_land_test method) (src.toolbox.steps.custom.qc.range_test.range_test method) (src.toolbox.steps.custom.qc.spike_test.spike_test method) (src.toolbox.steps.custom.qc.stuck_value_test.stuck_value_test method) (src.toolbox.steps.custom.qc.valid_profile_test.valid_profile_test method) run() (src.toolbox.pipeline.Pipeline method) (src.toolbox.steps.base_step.BaseStep method) (src.toolbox.steps.custom.apply_qc.ApplyQC method) (src.toolbox.steps.custom.blank_step.BlankStep method) (src.toolbox.steps.custom.derive_ctd.DeriveCTDVariables method) (src.toolbox.steps.custom.export.ExportStep method) (src.toolbox.steps.custom.find_profiles.FindProfilesStep method) (src.toolbox.steps.custom.gen_data.GenerateData method) (src.toolbox.steps.custom.interpolate_data.InterpolateVariables method) (src.toolbox.steps.custom.load_data.LoadOG1 method) (src.toolbox.steps.custom.profile_direction.ProfileDirection method) (src.toolbox.steps.custom.variables.bbp.BBPFromBeta method) (src.toolbox.steps.custom.variables.bbp.IsolateBBPSpikes method) (src.toolbox.steps.custom.variables.chla.chla_deep_correction method) (src.toolbox.steps.custom.variables.chla.chla_quenching_correction method) (src.toolbox.steps.custom.variables.oxygen.DeriveCalibratedPhase method) (src.toolbox.steps.custom.variables.oxygen.DeriveOptodeTemperature method) (src.toolbox.steps.custom.variables.oxygen.DeriveOxygenConcentration method) (src.toolbox.steps.custom.variables.oxygen.DeriveUncalibratedPhase method) (src.toolbox.steps.custom.variables.oxygen.MolarDOXYPressureCorrection method) (src.toolbox.steps.custom.variables.oxygen.MolarDOXYSalinityCorrection method) (src.toolbox.steps.custom.variables.oxygen.PhasePressureCorrection method) (src.toolbox.steps.custom.variables.salinity.AdjustSalinity method) run_all() (src.toolbox.pipeline_manager.PipelineManager method) run_last_step() (src.toolbox.pipeline.Pipeline method) running_average_nan() (in module src.toolbox.steps.custom.variables.salinity) S safe_median_datetime() (in module src.toolbox.utils.time) save() (src.toolbox.pipeline_manager.PipelineManager method) save_all_configs() (src.toolbox.pipeline_manager.PipelineManager method) save_config() (src.toolbox.pipeline.Pipeline method) (src.toolbox.steps.base_step.BaseStep method) (src.toolbox.utils.config_mirror.ConfigMirrorMixin method) save_manager_config() (src.toolbox.pipeline_manager.PipelineManager method) save_pipeline_configs() (src.toolbox.pipeline_manager.PipelineManager method) set_param() (src.toolbox.utils.config_mirror.ConfigMirrorMixin method) settings (src.toolbox.pipeline_manager.PipelineManager attribute) spike_test (class in src.toolbox.steps.custom.qc.spike_test) src.toolbox module src.toolbox.pipeline module src.toolbox.pipeline_manager module src.toolbox.steps module src.toolbox.steps.base_step module src.toolbox.steps.base_test module src.toolbox.steps.custom module src.toolbox.steps.custom.apply_qc module src.toolbox.steps.custom.blank_step module src.toolbox.steps.custom.derive_ctd module src.toolbox.steps.custom.export module src.toolbox.steps.custom.find_profiles module src.toolbox.steps.custom.gen_data module src.toolbox.steps.custom.interpolate_data module src.toolbox.steps.custom.load_data module src.toolbox.steps.custom.profile_direction module src.toolbox.steps.custom.qc module src.toolbox.steps.custom.qc.archive module src.toolbox.steps.custom.qc.blank_test module src.toolbox.steps.custom.qc.flag_full_profile module src.toolbox.steps.custom.qc.impossible_date_test module src.toolbox.steps.custom.qc.impossible_location_test module src.toolbox.steps.custom.qc.impossible_speed_test module src.toolbox.steps.custom.qc.par_irregularity_test module src.toolbox.steps.custom.qc.position_on_land_test module src.toolbox.steps.custom.qc.range_test module src.toolbox.steps.custom.qc.spike_test module src.toolbox.steps.custom.qc.stuck_value_test module src.toolbox.steps.custom.qc.valid_profile_test module src.toolbox.steps.custom.variables module src.toolbox.steps.custom.variables.bbp module src.toolbox.steps.custom.variables.chla module src.toolbox.steps.custom.variables.oxygen module src.toolbox.steps.custom.variables.salinity module src.toolbox.utils module src.toolbox.utils.alignment module src.toolbox.utils.config_mirror module src.toolbox.utils.diagnostics module src.toolbox.utils.processing_utils module src.toolbox.utils.qc_handling module src.toolbox.utils.time module src.toolbox.utils.validation module STEP_CLASSES (in module src.toolbox.steps) STEP_DEPENDENCIES (in module src.toolbox.steps) step_name (src.toolbox.steps.custom.apply_qc.ApplyQC attribute) (src.toolbox.steps.custom.blank_step.BlankStep attribute) (src.toolbox.steps.custom.derive_ctd.DeriveCTDVariables attribute) (src.toolbox.steps.custom.export.ExportStep attribute) (src.toolbox.steps.custom.find_profiles.FindProfilesStep attribute) (src.toolbox.steps.custom.gen_data.GenerateData attribute) (src.toolbox.steps.custom.interpolate_data.InterpolateVariables attribute), [1] (src.toolbox.steps.custom.load_data.LoadOG1 attribute) (src.toolbox.steps.custom.profile_direction.ProfileDirection attribute), [1] (src.toolbox.steps.custom.variables.bbp.BBPFromBeta attribute) (src.toolbox.steps.custom.variables.bbp.IsolateBBPSpikes attribute) (src.toolbox.steps.custom.variables.chla.chla_deep_correction attribute) (src.toolbox.steps.custom.variables.chla.chla_quenching_correction attribute) (src.toolbox.steps.custom.variables.oxygen.DeriveCalibratedPhase attribute) (src.toolbox.steps.custom.variables.oxygen.DeriveOptodeTemperature attribute) (src.toolbox.steps.custom.variables.oxygen.DeriveOxygenConcentration attribute) (src.toolbox.steps.custom.variables.oxygen.DeriveUncalibratedPhase attribute) (src.toolbox.steps.custom.variables.oxygen.MolarDOXYPressureCorrection attribute) (src.toolbox.steps.custom.variables.oxygen.MolarDOXYSalinityCorrection attribute) (src.toolbox.steps.custom.variables.oxygen.PhasePressureCorrection attribute) (src.toolbox.steps.custom.variables.salinity.AdjustSalinity attribute) steps (src.toolbox.pipeline.Pipeline attribute) stuck_value_test (class in src.toolbox.steps.custom.qc.stuck_value_test) summarise_all_profiles() (src.toolbox.pipeline_manager.PipelineManager method) summarising_profiles() (in module src.toolbox.utils.diagnostics) T test_name (src.toolbox.steps.base_test.BaseTest attribute) (src.toolbox.steps.custom.qc.blank_test.impossible_date_test attribute) (src.toolbox.steps.custom.qc.flag_full_profile.flag_full_profile attribute) (src.toolbox.steps.custom.qc.impossible_date_test.impossible_date_test attribute) (src.toolbox.steps.custom.qc.impossible_location_test.impossible_location_test attribute) (src.toolbox.steps.custom.qc.impossible_speed_test.impossible_speed_test attribute) (src.toolbox.steps.custom.qc.par_irregularity_test.par_irregularity_test attribute) (src.toolbox.steps.custom.qc.position_on_land_test.position_on_land_test attribute) (src.toolbox.steps.custom.qc.range_test.range_test attribute) (src.toolbox.steps.custom.qc.spike_test.spike_test attribute) (src.toolbox.steps.custom.qc.stuck_value_test.stuck_value_test attribute) (src.toolbox.steps.custom.qc.valid_profile_test.valid_profile_test attribute) tested_variables (src.toolbox.steps.custom.qc.range_test.range_test attribute) U update_parameters() (src.toolbox.steps.base_step.BaseStep method) update_qc() (src.toolbox.utils.qc_handling.QCHandlingMixin method) V valid_profile_test (class in src.toolbox.steps.custom.qc.valid_profile_test) validate() (in module src.toolbox.utils.validation) validate_with_device() (src.toolbox.pipeline_manager.PipelineManager method) visualise_pipeline() (src.toolbox.pipeline.Pipeline method) W water_vapour_partial_pressure() (src.toolbox.steps.custom.variables.oxygen.MolarDOXYSalinityCorrection method) window_size (src.toolbox.steps.custom.qc.spike_test.spike_test attribute)